The court also allowed Asaram to confront witnesses on the issue of victim’s age.
A bench headed by Justice T S Thakur directed that the board file its report before the court within four weeks.
The apex court had in August directed setting up of a board of doctors to examine 76-year-old Asaram.
Two boys had gone missing from Asaram Bapu’s gurukul on July 3, 2008 under mysterious circumstances.
Court asked Asaram to approach Gujarat High Court for seeking bail in rape case lodged against him in Surat.
The Apex court, however agreed to hear Asaram Bapu’s bail plea in another rape case.
The showdown between Asaram Bapu and his aide-turned-opponent Amrut Prajapati, who was murdered in Rajkot
Vaid Amrut Prajapati was shot at his clinic at around 1.15 pm at his Rajkot clinic on May 23.
The Superme Court Monday refused to stall the trial against self-styled godman Asaram Bapu in a sexual assault case.
Choudhary had also assisted lawyers coming to represent Asaram including Ram Jethmalani and Omkar Singh Lakhawat in different courts.
Defence counsel had moved the application on May 1 and cited the victims’ pre-school certificate as a ground.
According to the police, the attackers might have been given financial help from the ashrams.
Recently, Rakesh Patel, a key witness, was stabbed by two men.
Self-styled godman Asaram Bapu appeared pale and broken in the court after hearing the charges.
The victim was with Asaram for about 45 minutes in the kutir which is located 2 km away from Gurukul Ashram.